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Sr. ML Engineer

Vivodyne logo

Senior Bioinformatician

VivodyneDrug Discovery company
San Francisco, United StatesSenior
Khosla Ventures logo
Khosla Ventures
Kairos Ventures
CS Ventures
MBX Capital
Bison Ventures
Lingotto Investment Management
Data & AI

About the role

TL;DR

Develop and own analytical methods for large-scale biological data analysis.

  • The Software & Data Science team at Vivodyne tackles some of the hardest problems at the intersection of human biology, large-scale data, and machine learning.
  • Key Responsibilities Design, implement, and critically evaluate computational approaches for scRNA-seq, bulk RNA-seq, secretomics, and proteomics data.
  • Develop or adapt methods for perturbation modeling, causal inference, network reconstruction, ligand-receptor inference, and multi-omics integration.
  • Architect end-to-end analysis workflows in Python and/or R using modern workflow orchestration.
  • Partner with experimental biologists to frame the most relevant biological questions, design analyses, and recommend experiments.
  • Own dataset analysis to answer biological and client-driven questions with rigor.
  • Requirements Strong background in bioinformatics and computational biology.
  • Experience with scRNA-seq, bulk RNA-seq, secretomics, and proteomics data analysis.
  • Proficiency in Python and/or R for data analysis and pipeline development.
  • Ability to develop and adapt methods for complex biological data analysis.
  • Excellent communication skills to collaborate with experimental biologists and other teams.

Required skills

PythonR

Domain expertise

biotech

Tech stack

PythonR